57 ). Notice the prominent naïve B cell cluster of high IL4Rα expressors (green). ( C ) tSNE analysis of IL7R expression from the same dataset. Notice primarily T cell restricted expression of IL7R (blue). ( D ) Immune Cell Atlas cluster annotations for primary cell lineages, colored by lineage as in legend to the right. ( E ) Raw VEGF-647 median fluorescence intensities across two donors for isolated CD19+ cells from four technical replicates. Cells were incubated with 25 nM VEGF-647 and 10 nM of indicated kineTAC or isotype. ( F ) same as E , but using CD3+ T-cells. ( G and H ) VEGF-647 with PBMC components. 10 nM of the indicated kineTAC or isotype was added to 25 nM VEGF-647 along with 200 k cells/well PBMCs and allowed to internalize for 24 h. Percent VEGF positive was defined by the no VEGF-647 condition ( SI Appendix , Fig. S6 ). Analyzed by repeated measures donor-paired one-way ANOVA, with P values for Dunnett’s correction for multiple comparisons to the kineTAC of interest (IL4-Beva for B cells, IL7-Beva for T cells) (* P < 0.05, ** P < 0.01). ( G ) Analysis of B cell gate and h analysis of T cell gate. " width="100%" height="100%">
Journal: Proceedings of the National Academy of Sciences of the United States of America
Article Title: A cytokine receptor–targeting chimera toolbox for expanding extracellular targeted protein degradation
doi: 10.1073/pnas.2524129123
Figure Lengend Snippet: IL4 and IL7 kineTACs enable cell type–specific VEGF internalization in primary lymphocytes and PBMCs. ( A ) Diagram depicting tissue-specific expression of potential kineTAC receptors. ( B ) tSNE analysis of IL4Rα expression from scRNA seq of two PBMC donors, obtained from the Immune Cell Atlas ( 57 ). Notice the prominent naïve B cell cluster of high IL4Rα expressors (green). ( C ) tSNE analysis of IL7R expression from the same dataset. Notice primarily T cell restricted expression of IL7R (blue). ( D ) Immune Cell Atlas cluster annotations for primary cell lineages, colored by lineage as in legend to the right. ( E ) Raw VEGF-647 median fluorescence intensities across two donors for isolated CD19+ cells from four technical replicates. Cells were incubated with 25 nM VEGF-647 and 10 nM of indicated kineTAC or isotype. ( F ) same as E , but using CD3+ T-cells. ( G and H ) VEGF-647 with PBMC components. 10 nM of the indicated kineTAC or isotype was added to 25 nM VEGF-647 along with 200 k cells/well PBMCs and allowed to internalize for 24 h. Percent VEGF positive was defined by the no VEGF-647 condition ( SI Appendix , Fig. S6 ). Analyzed by repeated measures donor-paired one-way ANOVA, with P values for Dunnett’s correction for multiple comparisons to the kineTAC of interest (IL4-Beva for B cells, IL7-Beva for T cells) (* P < 0.05, ** P < 0.01). ( G ) Analysis of B cell gate and h analysis of T cell gate.
Article Snippet: Antibodies used included rabbit anti-human EGFR (Cell Signaling Technology, Cat# 4267S, 1:1,000), rabbit anti-human PD-1 (Cell Signaling Technology, Cat# D4W2J, 1:1,000), mouse anti-human IL7R (R&D Systems, Cat# MAB306, 1:1,000), rabbit anti-human phospho NF-κB p65 Ser 536 (Cell Signaling Technology, Cat#93H1, 1:1,000), mouse anti-human NF-κB p65 (Cell Signaling Technology, Cat#93H1, 1:1,000), mouse anti-human β-actin (Cell Signaling Technology, Cat# 8H10D10, 1:1,000), and mouse anti-human β-tubulin (Cell Signaling Technology, Cat# DM1a, 1:1,000).
Techniques: Expressing, Fluorescence, Isolation, Incubation